全部文献期刊学位论文会议报纸专利标准年鉴图书|学者科研项目
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作者:Vassily Lyubetsky , Roman Gershgorin , Konstantin Gorbunov
来源:[J].BMC Bioinformatics(IF 3.024), 2017, Vol.18 (1)Springer
摘要:Chromosome structure is a very limited model of the genome including the information about its chromosomes such as their linear or circular organization, the order of genes on them, and the DNA strand encoding a gene. Gene lengths, nucleotide composition, and intergenic regions a...
作者:Lyubetsky Vassily , Gershgorin Roman , Gorbunov Konstantin
来源:[J].BMC bioinformatics(IF 3.024), 2017, Vol.18 (1), pp.537PubMed
摘要:Chromosome structure is a very limited model of the genome including the information about its chromosomes such as their linear or circular organization, the order of genes on them, and the DNA strand encoding a gene. Gene lengths, nucleotide composition, and intergenic regions a...
作者:Avdeyev Pavel , Jiang Shuai , Aganezov Sergey ...
来源:[J].Journal of computational biology : a journal of computational molecular cell biology, 2016, Vol.23 (3), pp.150-64PubMed
摘要:Since most dramatic genomic changes are caused by genome rearrangements as well as gene duplications and gain/loss events, it becomes crucial to understand their mechanisms and reconstruct ancestral genomes of the given genomes. This problem was shown to be NP-complete even in th...
作者:Ren Longhui , Huang Wei , Cannon Steven B
来源:[J].The New phytologist, 2019, Vol.223 (4), pp.2090-2103PubMed
摘要:Reconstruction of an ancestral genome for a set of plant species has been a challenging task because of complex histories that may include whole-genome duplications, segmental duplications, independent gene duplications or losses, diploidization and rearrangement events. Here, we...
作者:Nakatani Yoichiro , McLysaght Aoife
来源:[J].Bioinformatics (Oxford, England), 2017, Vol.33 (14), pp.i369-i378PubMed
摘要:It has been argued that whole-genome duplication (WGD) exerted a profound influence on the course of evolution. For the purpose of fully understanding the impact of WGD, several formal algorithms have been developed for reconstructing pre-WGD gene order in yeast and plant. Howeve...
作者:Tamir Tuller , Hadas Birin , Martin Kupiec ...
来源:[B].Lecture Notes in Computer Science2009Springer
摘要:Abstract The inference of ancestral genomes is a fundamental problem in molecular evolution. Due to the statistical nature of this problem, the most likely or the most parsimonious ancestral genomes usually include considerable error rates. In general, these errors can...

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